NCPI FHIR Implementation Guide
0.2.0 - ci-build

NCPI FHIR Implementation Guide - Local Development build (v0.2.0). See the Directory of published versions

Example ConceptMap: Concept Map showing representing harmonization mappings

Active as of 2023-08-08

Mapping from Table ValueSet to Harmonized ValueSet for data table

ACTIVE. Published on 2023-08-08 19:23:30+0000 by NCPI FHIR Working Group (NCPI FHIR Working Group: https://github.com/nih-ncpi, Meen Chul Kim: meenchul@d3b.center).


Group 1Mapping from Datatable CodeSystem (lists all variables) to https://uts.nlm.nih.gov/uts/umls

Source CodeRelationshipTarget Code
subjectid (Subject's Unique Identifier)is equivalent toC2348584 (Subject Unique Identifier)
genderis equivalent toC0079399 (Gender)
age_at_enrollment (Subject's Age at Enrollment in days)is equivalent toC168843 (Age in Days at Enrollment)
bmi (Subject's BMI, Measured at Enrollment)maps to wider conceptC1305855 (Body mass index)
status (Subject's status (Case or Control))is equivalent toC0872128 (case control)

Group 2Mapping from Datatable CodeSystem (lists all variables) to Logical Observation Identifiers, Names and Codes (LOINC)

Source CodeRelationshipTarget Code
bmi (Subject's BMI, Measured at Enrollment)maps to wider conceptLP35925-4 (Body mass index (BMI))

Group 3Mapping from Datatable CodeSystem (lists all variables) to Human Phenotype Ontology

Source CodeRelationshipTarget Code
status (Subject's status (Case or Control))is equivalent toHP:0010772 (Anomalous pulmonary venous return)

Group 4Mapping from Datatable CodeSystem (lists all variables) to Mondo Disease Ontology

Source Concept DetailsRelationshipTarget Concept DetailsProperties
Codes from Datatable CodeSystem (lists all variables)Codes from Mondo Disease Ontology
statusSubject's status (Case or Control)is equivalent toMONDO:0017705congenital pulmonary venous return anomaly
is equivalent toMONDO:0007130congenital total pulmonary venous return anomaly